PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009775417.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 331aa    MW: 35693.2 Da    PI: 5.942
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009775417.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_176.24.3e-24232294163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v++L++eN+aLk+e+ +l++e++kl+se+
  XP_009775417.1 232 ERELKRQKRKQSNRESARRSRLRKQAECEELQQRVETLSNENHALKEEMRKLSEECEKLTSEN 294
                     89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.6E-30193IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1702.1E-19227291No hitNo description
PfamPF001701.2E-21232294IPR004827Basic-leucine zipper domain
SMARTSM003384.2E-22232296IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.507234297IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-11235291No hitNo description
CDDcd147022.70E-23237287No hitNo description
PROSITE patternPS000360239254IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MGAGEESTPA KPSKATSTQE TQATPSYPDW SSSMQAYYGA GAAPHFFSPT VASPTPHPYM  60
WGGQHPLMPP YGAPVPYPAL YPPTGVYAHP NMPMTPNPLQ ANPESDSKAP DPKDQSTSKK  120
LKGYTGGKAG ESGKATSGSG NDGATRSAES GSEGSSDAND ENDNHEFSAN KSRNFDLMLA  180
NGNPVAMPAT NLNIGMDLWN ASSAGPGMIK MRSNQSGVAP APGIGREWIQ DERELKRQKR  240
KQSNRESARR SRLRKQAECE ELQQRVETLS NENHALKEEM RKLSEECEKL TSENNSIKEE  300
LTRLCGPEAV SKLESNANAT HLQSNVEEAN S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1248254RRSRLRK
2248255RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0138730.0BT013873.1 Lycopersicon esculentum clone 132853R, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009775417.10.0PREDICTED: G-box-binding factor 1-like isoform X2
SwissprotP427741e-105GBF1_ARATH; G-box-binding factor 1
TrEMBLK4B6I30.0K4B6I3_SOLLC; Uncharacterized protein
STRINGSolyc02g062950.2.10.0(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.21e-100G-box binding factor 1